Dr Thibaut Jombart

Publications


Journals

  • Jombart T; Devillard S; Balloux F. (2010). Discriminant analysis of principal components: a new method for the analysis of genetically structured populations. BMC Genet. 11:94. DOI.
  • Tanabe K; Mita T; Jombart T; Eriksson A; Horibe S; Palacpac N; Ranford-Cartwright L; Sawai H; et alSakihama N; Ohmae H; Nakamura M; Ferreira MU; Escalante AA; Prugnolle F; Björkman A; Färnert A; Kaneko A; Horii T; Manica A; Kishino H; Balloux F. (27 Jul 2010). Plasmodium falciparum accompanied the human expansion out of Africa. Curr Biol. 20:1283-1289. DOI.
  • Jombart T; Balloux F; Dray S. (1 Aug 2010). adephylo: new tools for investigating the phylogenetic signal in biological traits. Bioinformatics. 26:1907-1909. DOI.
  • Jombart T; Eggo RM; Dodd PJ; Balloux F. (Feb 2011). Reconstructing disease outbreaks from genetic data: a graph approach. Heredity (Edinb). 106:383-390. DOI.
  • Nübel U; Dordel J; Kurt K; Strommenger B; Westh H; Shukla SK; Zemlicková H; Leblois R; et alWirth T; Jombart T; Balloux F; Witte W. (Apr 2010). A timescale for evolution, population expansion, and spatial spread of an emerging clone of methicillin-resistant Staphylococcus aureus. PLoS Pathog. 6:e1000855. DOI.
  • Jombart T; Pavoine S; Devillard S; Pontier D. (7 Jun 2010). Putting phylogeny into the analysis of biological traits: a methodological approach. J Theor Biol. 264:693-701. DOI.
  • Jombart T; Eggo RM; Dodd P; Balloux F. (2009). Spatiotemporal dynamics in the early stages of the 2009 A/H1N1 influenza pandemic. PLoS Curr. 1:RRN1026.
  • Fraser C; Donnelly CA; Cauchemez S; Hanage WP; Van Kerkhove MD; Hollingsworth TD; Griffin J; Baggaley RF; et alJenkins HE; Lyons EJ; Jombart T; Hinsley WR; Grassly NC; Balloux F; Ghani AC; Rambaut A; Ferguson NM. (28 Aug 2009). Influenza: Making Privileged Data Public Response. SCIENCE. 325:1072-1073.
  • Balloux F; Handley LJL; Jombart T; Liu H; Manica A. (7 Oct 2009). Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation. P R SOC B. 276:3447-3455. DOI.
  • Fraser C; Donnelly CA; Cauchemez S; Hanage WP; Van Kerkhove MD; Hollingsworth TD; Griffin J; Baggaley RF; et alJenkins HE; Lyons EJ; Jombart T; Hinsley WR; Grassly NC; Balloux F; Ghani AC; Ferguson NM; Rambaut A; Pybus OG; Lopez-Gatell H; Alpuche-Aranda CM; Chapela IB; Zavala EP; Guevara DME; Checchi F; Garcia E; Hugonnet S; Roth C; WHO Rapid Pandemic Assessment Coll. (19 Jun 2009). Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings. SCIENCE. 324:1557-1561. DOI.
  • Jombart T; Dray S; Dufour AB. (Feb 2009). Finding essential scales of spatial variation in ecological data: a multivariate approach. ECOGRAPHY. 32:161-168. DOI.
  • Jombart T; Pontier D; Dufour AB. (Apr 2009). Genetic markers in the playground of multivariate analysis. HEREDITY. 102:330-341. DOI.
  • Laloe D; Jombart T; Dufour AB; Moazami-Goudarzi K. (Sep 2007). Consensus genetic structuring and typological value of markers using multiple co-inertia analysis. GENET SEL EVOL. 39:545-567. DOI.
  • Jombart T; Devillard S; Dufour AB; Pontier D. (Jul 2008). Revealing cryptic spatial patterns in genetic variability by a new multivariate method. HEREDITY. 101:92-103. DOI.
  • Devillard S; Jombart T; Pontier D. (2009). Revealing cryptic genetic structuring in an urban population of stray cats (Felis silvestris catus). MAMM BIOL. 74:59-71. DOI.
  • Jombart T. (1 Jun 2008). adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics. 24:1403-1405. DOI.
Share this on DeliciousTweet thisDigg thisStumble thisShare this on Facebook